Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015900872.1_cds_XP_016450885.1_45292
CDS Infomation

[gene=LOC107775652] [db_xref=GeneID:107775652] [protein=serine/threonine-protein kinase RIO1-like] [protein_id=XP_016450885.1] [location=join(29435..29788,30772..30900,31639..31731,31834..31913,32166..32279,35990..36063,38180..38256,38707..38790,38875..38967,39145..39252,39366..39437,39814..40254)] [gbkey=CDS]
Sequence

ATGGCGGAACCTGCTGACAAATTAGAGAAACCCCAAAAAGCTGAAAACGAAAAAGAAGCA
GCAGTAGTAGATGAAGAATTAGAAGAGGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAA
GAAGAAGAAGAAGAGGGAGAATTATCATGGTCTTCAGACTCAGAAATTGGTGAAGCTTTA
GATTATTTGGACACAAAAGATGATTCTGAATCCATAAATGGTGCCTTTAGTCTCCAAACA
AGACGCCCAAATGCTCACGGAGGACTTCACTCTCGGCCCAATTCTTCTGCTTTACAACCT
CTTTCTAATCGTACCCAGAAATTTTCTAATCATATTATAGCTTCACCATTAGAGGAATGG
GAAGGGAGGATCAAAGTTGGCATGTCAAACTCCGTGACTACTGCAATTCGTGGAAGTGTT
CGGGATATGGCCATTGGTAGAACTAAAACTACAGAGAAAGCAGACCGTGCCACTGTTGAA
CAGGCAATTGATCCAAGAACACGAATGGTTTTGTTTAAAATGCTGAACCGCGGTGTCTTT
CATGATATCAACGGCTGTATTTCAACTGGGAAAGAGGCCAATGTTTATCATGCAACAAAA
GCTGATGGTCAGGAACTGGCAATCAAAGTATACAAAACTTCAGTCCTTGTATTCAAGGAT
AGAGATCGCTATGTACAGGGTGACTATCGCTTCAGATATGGATACTGCAAGCACAATCCT
CGGAAAATGGTTAAAACATGGGCTGAGAAAGAAATGAGGAATCTAATGAGGCTGAGGGCA
GCTGGAATCAGGTGTCCTGCTCCAATTCTCTTGAGGCTTCATGTTCTTGTGATGGAATTC
ATAGGGAAAGGAGGTTGGGCTGCACCTCGACTAAAGGATGCTGCTTTATCTCTTGACAAG
TTACGTGAATGTTATGTGGAGATCATTATGGCAATGCGAACTCTATATCAGAAGTGCAAG
CTAGTGCATGGTGACTTGAGCGAGTATAATATCCTATATTACGAGGGTCACTTATATGTT
ATTGATGTTTCACAATCAGTTGATCTTGATCATCCTCATGCACTTGATTTCCTCCGAGAG
GATTGTGTCCATGTTTCTGACTTTTTTAAAAAACATGGTGTGGCTGTGATGACAATTCGG
GAGTTGTTTGATTTTATAGTTGATCCTACTATTGATGATGAATCAGTGGATAGCTATTTG
GAAAAGGTTCAAGAAAAAATTATGGCTAGAGGTGAGATGACTGCAGAAGAAGAAATTGCC
GACTCTGTATTTATTCAGTCATTTATTCCCAAGACTCTTGATCATGTGAAAGACGCTGAA
GCAGATGTTCAACGCATTATTAGTGGCGAGGACACAGGAGACATGTACTACAAAACTATT
ACAGGCCTCAAGCAGGCGCTTTCAGGGACAAACCCTTCAGCAGAAAATCAGCAGCACAAA
CAAAATGGTGAACGGGGACAAGAGGCCACTGCTGCAGCTGAACTCGACAAACCATCTGAT
GGTGAATCAGAGACCGAGTCAGATGATGACGATGAAAGTGATTCTAGTGAGGGCTTTTCA
TCCGATGGTGAAAAACCAACAGCTGCTGAAAAGAAAACAGCTAGAAAAGAGAATAAGAAG
AAAGTTAAAGAAGAGAAAAGGGAGGCTCGGAAACACAAAGTACCAAAAGCTGTGAAAAAG
AAGAAGAAAAAGTTGGCCAAAGCCAAGAAGTATAGATAA

Peptide Sequence

PEP ID

XP_016450885.1
PEP Infomation

PREDICTED: serine/threonine-protein kinase RIO1-like [Nicotiana tabacum]
Sequence

MAEPADKLEKPQKAENEKEAAVVDEELEEEEEEEEEEEEEEEEEEGELSWSSDSEIGEAL
DYLDTKDDSESINGAFSLQTRRPNAHGGLHSRPNSSALQPLSNRTQKFSNHIIASPLEEW
EGRIKVGMSNSVTTAIRGSVRDMAIGRTKTTEKADRATVEQAIDPRTRMVLFKMLNRGVF
HDINGCISTGKEANVYHATKADGQELAIKVYKTSVLVFKDRDRYVQGDYRFRYGYCKHNP
RKMVKTWAEKEMRNLMRLRAAGIRCPAPILLRLHVLVMEFIGKGGWAAPRLKDAALSLDK
LRECYVEIIMAMRTLYQKCKLVHGDLSEYNILYYEGHLYVIDVSQSVDLDHPHALDFLRE
DCVHVSDFFKKHGVAVMTIRELFDFIVDPTIDDESVDSYLEKVQEKIMARGEMTAEEEIA
DSVFIQSFIPKTLDHVKDAEADVQRIISGEDTGDMYYKTITGLKQALSGTNPSAENQQHK
QNGERGQEATAAAELDKPSDGESETESDDDDESDSSEGFSSDGEKPTAAEKKTARKENKK
KVKEEKREARKHKVPKAVKKKKKKLAKAKKYR

Transcript Sequence

Gene sequence data has not been registered.